All functions
|
BERT
|
BERT: Biomass Estimation for Research on Toothfish |
catch_data_sim_RB
|
Simulated catch data from hypothetical Research blocks for vignette examples |
catch_data_sim_RefArea
|
Simulated catch data from Reference Areas for vignette examples |
cpue_bio
|
CPUE Seabed area analogy |
cpue_bootstrap
|
Estimate confidence intervals using a non-parametric bootstrap. |
CPUE_seabed
|
CPUE Seabed area analogy |
est_fish_weight
|
Estimate tagged fish weight from fish lengths |
extract_catch_data_cpue_est
|
Extract haul data |
extract_catch_data_tag_est
|
Extract haul data |
extract_recaptures_season
|
Extract and reformat release and recapture data |
is.integer0
|
Test for integer zero |
length_weight_data_sim_RB
|
Simulated tagged fish length and weight data from hypothetical Research blocks for vignette examples |
length_weight_data_sim_RefArea
|
Simulated tagged fish length and weight data from hypothetical Reference Areas for vignette examples |
load_data
|
Load CCAMLR data extracts |
multi_release
|
Multiple tag release estimate of population size |
pars
|
Parameters for specifying multiple release tag model |
chapman_n chapman_wt petersen
|
Petersen estimators |
print
|
Print method for single release, single recapture models |
RB_seabed_area
|
Research Block Seabed Area |
recapture_data_sim_RB
|
Simulated tagged fish recapture data from hypothetical Research blocks for vignette examples |
Ref_area_seabed_area
|
Reference Area Seabed Area |
release_data_sim_RB
|
Simulated tagged fish release data from hypothetical Research blocks for vignette examples |
release_data_sim_RefArea
|
Simulated tagged fish release data from Reference Areas for vignette examples |
single_release
|
Single tag release estimate of population size |
specify_params
|
Specify parameters for tag-based biomass estimate |
summary
|
S3 method for bootstrapped confidence intervals |
summary
|
S3 method for bootstrapped confidence intervals |
summary
|
S3 method for bootstrapped confidence intervals |
summary
|
Summary method for single release, single recapture models |
tag_bootstrap
|
Bootstrap method for single release tag-return studies |